dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001549_12|CGC18
Gene ID: MGYG000001549_04131
Location and strand information: 1890719 - 1891594 (+)
Family: 3.A.1.1.36
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001549_12|CGC18
Gene ID: MGYG000001549_04132
Location and strand information: 1891596 - 1892474 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001549_12|CGC18
Gene ID: MGYG000001549_04133
Location and strand information: 1892592 - 1893518 (+)
Family: GH43|GH43_34
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 4.5812
Protein molecular weight: 35138.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001549_12|CGC18
Gene ID: MGYG000001549_04134
Location and strand information: 1894592 - 1895584 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001549_12|CGC18
Gene ID: MGYG000001549_04135
Location and strand information: 1895581 - 1895751 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001549_12|CGC18
Gene ID: MGYG000001549_04136
Location and strand information: 1896243 - 1897886 (+)
Family: GH29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5072
Protein molecular weight: 61741.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001549_12|CGC18
Gene ID: MGYG000001549_04137
Location and strand information: 1898276 - 1901077 (+)
Family: CBM6|GH3
Protein type: CAZyme
Protein description: Xylan 1,4-beta-xylosidase
Protein isoelectric point: 5.0439
Protein molecular weight: 106378.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001549_12|CGC18
Gene ID: MGYG000001549_04138
Location and strand information: 1901074 - 1903335 (+)
Family: GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3882
Protein molecular weight: 86875.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001549_12|CGC18
Gene ID: MGYG000001549_04139
Location and strand information: 1903527 - 1905320 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001549_04131	Lactose transport system permease protein LacF	TC	1890719	1891594	+	3.A.1.1.36
MGYG000001549_04132	L-arabinose transport system permease protein AraQ	TC	1891596	1892474	+	3.A.1.1.34
MGYG000001549_04133	Xylosidase/arabinosidase	CAZyme	1892592	1893518	+	GH43\| GH43_34
MGYG000001549_04134	hypothetical protein	null	1894592	1895584	+	Virulence_RhuM
MGYG000001549_04135	hypothetical protein	null	1895581	1895751	+	No domain
MGYG000001549_04136	hypothetical protein	CAZyme	1896243	1897886	+	GH29
MGYG000001549_04137	Xylan 1,4-beta-xylosidase	CAZyme	1898276	1901077	+	CBM6\| GH3
MGYG000001549_04138	hypothetical protein	CAZyme	1901074	1903335	+	GH95
MGYG000001549_04139	hypothetical protein	TC	1903527	1905320	+	8.A.59.2.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature